Reference

Decomposing contrasts Function for decomposing one or several observed contrasts (comparisons between conditions).
decomposeVar()	Decompose input contrasts to decoded and residual fractions
Identifying similar contrasts Search a large human or mouse database (derived from ARCHS4) for contrasts similar to your own one(s).
loadContrastDatabase()	Load contrast database
queryWithContrasts()	Query the contrast database with a set of contrasts
plotQueryResultsManh()	Visualize query results as a composite manhattan/density plot.
plotQueryResultsViolin()	Visualize query results as violin plots
Misc functions
testOrthosEnv()	Test conda environment
General package information
orthos orthos-package	orthos - variance decomposition using conditional variational auto-encoders