Changelog

Source: NEWS.md

eisaR 1.15.1

  • Add legacyQLF argument to runEISA (will be passed to edgeR::glmQLFit)

eisaR 1.5.2

  • Add options to collapse introns by gene and restrict introns to feature ranges in getFeatureRanges.

eisaR 1.0

  • Initial version
  • R implementation of Exon-Intron Split Analysis (EISA, doi: 10.1038/nbt.3269)
  • functionality for extracting spliced and unspliced transcript sequences, as well as intron sequences. e.g. for use in RNA velocity analysis