Enable ez-zarr

Activate built-in conda environment that provides python, ez-zarr and its dependencies using useBasiliskEnv, and import the required modules through reticulate.

Usage

enableEzZarr()

Value

A list with imported modules:

plt

matplotlib.pyplot

np

numpy

ez_zarr

ome_zarr

ez_zarr.ome_zarr

plotting

ez_zarr.plotting

utils

ez_zarr.utils

Details

For more usage examples see vignette(package="ezzarr").

Author

Charlotte Soneson

Examples

env <- enableEzZarr()
names(env)
#> [1] "plt"     "np"      "ez_zarr"
env$np$`__version__`
#> [1] "2.2.5"
env$ez_zarr$ome_zarr$`__version__`
#> [1] "0.3.8"