Changelog

Source: NEWS.md

SingleMoleculeGenomicsIO 0.1.1

• Add sampling mode to countStatePairs and countMismatchStatePairs

SingleMoleculeGenomicsIO 0.1.0

• Add readMismatchBam and countMismatchStatePairs supporting BAM files from Bisulfite-seq or deaminase-based experiments.
• Initialize reading functions based on footprintR v0.4.0.