inst/CITATION
Langmead B, Trapnell C, Pop M, Salzberg SL. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biology 10(3):R25 (2009).
@Article{, title = {Ultrafast and memory-efficient alignment of short DNA sequences to the human genome}, author = {Ben Langmead and Cole Trapnell and Mihai Pop and Steven L Salzberg}, journal = {Genome Biology}, volume = {10}, number = {3}, pages = {R25}, year = {2009}, note = {PMID:19261174}, doi = {10.1186/gb-2009-10-3-r25}, }
Au KF, Jiang H, Lin L, Xing Y, Wong WH. Detection of splice junctions from paired-end RNA-seq data by SpliceMap. Nucleic Acids Research, 38(14):4570-8 (2010).
@Article{, title = {Detection of splice junctions from paired-end RNA-seq data by SpliceMap}, author = {Kin Fai Au and Hui Jiang and Lan Lin and Yi Xing and Wing Hung Wong}, journal = {Nucleic Acids Research}, volume = {38}, number = {14}, pages = {4570--4578}, year = {2010}, note = {PMID:20371516}, doi = {10.1093/nar/gkq211}, }
Hahne F, Lerch A, Stadler MB. Rbowtie: An R wrapper for bowtie and SpliceMap short read aligners. (unpublished)
@Unpublished{, title = {Rbowtie: An R wrapper for bowtie and SpliceMap short read aligners}, author = {Florian Hahne and Anita Lerch and Michael B Stadler}, note = {R package version 1.39.1}, }